Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs11719365 chr3:48280492 C/T 7.51E-5 519 39.53 41.27 19.13 KM Plot
KIRC rs11720026 chr3:48377921 T/C 3.97E-5 506 39.08 42.47 23.1 KM Plot
KIRC rs117351169 chr7:46582664 A/C 6.02E-5 508 47.73 33.57 28.7 KM Plot
KIRC rs117442381 chr21:47715208 C/T 3.97E-5 510 38.98 43.3 6.87 KM Plot
KIRC rs117443865 chr21:47959731 C/G 1.38E-5 524 39.08 42.2 6.87 KM Plot
KIRC rs117575534 chr19:56148963 T/G 1.86E-7 509 43.03 37.35 6.02 KM Plot
KIRC rs11761559 chr7:7730796 T/C 7.53E-5 526 38.97 47.58 5.47 KM Plot
KIRC rs117644441 chr10:9937539 G/A 4.3E-6 523 39.85 39.5 3.67 KM Plot
KIRC rs11765275 chr7:7740198 T/G 7.17E-5 526 39 45.62 5.47 KM Plot
KIRC rs11771027 chr7:7730990 C/T 5.83E-5 527 38.47 48.48 5.47 KM Plot
KIRC rs117817503 chr21:47729335 C/A 2.64E-5 513 38.97 43.8 17.23 KM Plot
KIRC rs118147753 chr7:46582679 G/T 5.98E-5 506 47.73 33.75 28.7 KM Plot
KIRC rs12037147 chr1:33646252 C/T 7.45E-5 527 41 40.6 21.53 KM Plot
KIRC rs12244314 chr10:3562621 G/A 2.47E-5 521 40 39.2 18.7 KM Plot
KIRC rs12283472 chr11:34949502 G/A 7.78E-13 527 40.6 33.35 3.48 KM Plot